# Boolean network model of the control of the budding yeast cell cycle regulation from # "The yeast cell-cycle network is robustly designed", # Fangting Li, Tao Long, Ying Lu, Qi Ouyang, Chao Tang, # PNAS April 6, 2004, vol. 101 no. 14 4781-4786. #total number of nodes .v 12 # labels of nodes and names of corresponding components # 1 = Cell size # 2 = Cln3 # 3 = SBF # 4 = MBF # 5 = Cln1,2 # 6 = Sic1 # 7 = Cln5,6 # 8 = Cdh1 # 9 = Clb1,2 # 10 = Mcm1/SFF # 11 = Cdc20&Cdc14 # 12 = Swi5 # As a result of simulation, we get the following 7 attractors of length 1: # 001010000000 # 000101000000 # 000101010000 # 000000000000 # 000001000000 # 000000010000 # 000001010000 # 1 = Cell size .n 1 0 # 2 = Cln3 .n 2 1 1 1 1 0 0 # 3 = SBF .n 3 3 2 3 9 -10 1 11- 1 1-0 1 00- 0 0-1 0 -01 0 # 4 = MBF .n 4 3 2 4 9 -10 1 11- 1 1-0 1 00- 0 0-1 0 -01 0 # 5 = Cln1,2 .n 5 1 3 1 1 0 0 # 6 = Sic1 .n 6 6 5 6 7 9 11 12 0100-- 1 -1001- 1 01-01- 1 010-1- 1 -100-1 1 01-0-1 1 010--1 1 -1-011 1 -10-11 1 01--11 1 0-00-1 1 --0011 1 0--011 1 0-0-11 1 0-001- 1 101--- 0 10-1-- 0 1-11-- 0 -011-- 0 10--0- 0 1-1-0- 0 -01-0- 0 1--10- 0 -0-10- 0 --110- 0 10---0 0 1-1--0 0 -01--0 0 1--1-0 0 -0-1-0 0 --11-0 0 1---00 0 -0--00 0 --1-00 0 ---100 0 # 7 = Cln5,6 .n 7 4 4 6 7 11 -010 1 1-10 1 101- 1 10-0 1 01-- 0 0-0- 0 -10- 0 0--1 0 -1-1 0 --01 0 # 8 = Cdh1 .n 8 5 5 7 8 9 11 0010- 1 -0101 1 0-101 1 001-1 1 00-01 1 11--- 0 1-0-- 0 -10-- 0 1--1- 0 -1-1- 0 --01- 0 1---0 0 -1--0 0 --0-0 0 ---10 0 # 9 = Clb1,2 .n 9 6 6 7 8 9 10 11 0101-- 1 0-011- 1 -1011- 1 01-11- 1 0-01-0 1 -101-0 1 01-1-0 1 --0110 1 0--110 1 -1-110 1 010--0 1 0-0-10 1 -10-10 1 01--10 1 010-1- 1 101--- 0 10-0-- 0 1-10-- 0 -010-- 0 10--0- 0 1-1-0- 0 -01-0- 0 1--00- 0 -0-00- 0 --100- 0 10---1 0 1-1--1 0 -01--1 0 1--0-1 0 -0-0-1 0 --10-1 0 1---01 0 -0--01 0 --1-01 0 ---001 0 # 10 = Mcm1/SFF .n 10 2 7 9 -1 1 1- 1 00 0 # 11 = Cdc20&Cdc14 .n 11 2 9 10 -1 1 1- 1 00 0 # 12 = Swi5 .n 12 4 9 10 11 12 0-1- 1 -11- 1 01-- 1 10-- 0 1-0- 0 -00- 0